Publications with Sergey Nurk, PhD

Postdoctoral Fellow

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A draft human pangenome reference
Nature, May 10, 2023
Liao W-W … Koren S … Nurk S … Rautiainen M … Rhie A … Walenz B … Phillippy AM … Paten B
Telomere-to-telomere assembly of diploid chromosomes with Verkko
Nature Biotechnology, February 16, 2023
Rautiainen M, Nurk S, Walenz BP, Logsdon GA, Porubsky D, Rhie A, Eichler EE, Phillippy AM, Koren S
The complete sequence of a human Y chromosome
bioRxiv, December 1, 2022
Rhie A, Nurk S … Koren S, Rautiainen M … Hansen NF … Mc Cartney AM … Walenz BP … Phillippy AM
The complete sequence of a human genome
Science, April 1, 2022
Nurk S, Koren S, Rhie A, Rautiainen M … Hansen NF … Jain C … Mc Cartney AM … Walenz BP … Phillippy AM
Segmental duplications and their variation in a complete human genome
Science, April 1, 2022
Vollger MR, Guitart X, Dishuck PC, Mercuri L, Harvey WT, Gershman A, Diekhans M, Sulovari A, Munson KM, Lewis AM, Hoekzema K, Porubsky D, Li R, Nurk S, Koren S, Miga KH, Phillippy AM, Timp W, Ventura M, Eichler EE
Complete genomic and epigenetic maps of human centromeres
Science, April 1, 2022
Altemose N … Rhie A, McCartney AM … Nurk S, Koren S … Phillippy AM … Miga KH
STRONG: metagenomics strain resolution on assembly graphs
Genome biology, July 26, 2021
Quince C, Nurk S, Raguideau S, James R, Soyer OS, Summers JK, Limasset A, Eren AM, Chikhi R, Darling AE
Critical Assessment of Metagenome Interpretation - the second round of challenges
bioRxiv, July 12, 2021
Meyer F … Antipov D … Nurk S … McHardy AC
The structure, function and evolution of a complete human chromosome 8
Nature, April 7, 2021
Logsdon GA … Koren S, Nurk S … Rhie A … Jain C … Phillippy AM, Eichler EE
HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
Genome Research, August 14, 2020
Nurk S, Walenz BP, Rhie A, Vollger MR, Logsdon GA, Grothe R, Miga KH, Eichler EE, Phillippy AM, Koren S