Antipov

Software

TTT

Trivial Tangle Traverser (TTT) is a tool developed to construct model sequences for the remaining gaps in the T2T assemblies and replace error-prone and labour-intensive manual graph curation step.

News posts

Verkko2 is released!

January 2, 2025

Publications

see all 10 publications with Dmitry Antipov

Biobank-scale genotyping of Robertsonian translocations reveals hidden structural variation on the human acrocentric chromosomes

bioRxiv, March 10, 2026

Rhie A, Kim J, Rodriguez-Algarra F, Solar SJ, Koren S, Antipov D, Wilczewski CM, Maxwell GL, Gerton J, Paschall J, Potapova T, Wolfsberg TG, Singh S, del Castillo del Rio SO, Human Pangenome Reference Consortium, Turner C, Rakyan VK, Phillippy AM

Automatic Generation of Model Sequences for Complex Regions in Assembly Graphs

bioRxiv, March 10, 2026

Antipov D, Chen Y, Sollitto M, Phillippy AM, Formenti G, Koren S

The complete genome of the KOLF2.1J reference iPSC line

bioRxiv, March 9, 2026

Full text

Alvarez Jerez P, Rhie A, Kim J … Antipov D, Koren S … Hansen NF … Phillippy AM, Blauwendraat C

Complete genomes of a multi-generational pedigree to expand studies of genetic and epigenetic inheritance

bioRxiv, December 16, 2025

Cechova M … Solar SJ … Antipov D, Koren S … Phillippy AM … Miga KH

GIS

Dmitry Antipov, PhD

Postdoctoral Fellow

TTT

Verkko2 is released!