Adam Phillippy, PhD

Investigator

adam.phillippynih.gov

Projects

MashMap

A fast and approximate long read mapper

Canu

A single molecule sequence assembler for genomes large and small

Mash

Fast genome and metagenome distance estimation using MinHash

MHAP

A probabilistic sequence overlap algorithm
News posts

MashMap: approximate long-read mapping using minimizers and MinHash

May 22, 2017

Assembling the Cliveome

April 28, 2017

Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly

March 6, 2017

Assembly of a human genome from nanopore sequencing data

January 8, 2017
Publications
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
Genome Research, May 1, 2017
Schneider VA … Koren SPhillippy AM … Church DM