Publications with Dmitry Antipov, PhD

Postdoctoral Fellow

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Complete genomes of a multi-generational pedigree to expand studies of genetic and epigenetic inheritance
bioRxiv, December 16, 2025
Cechova M … Solar SJ … Antipov D, Koren S … Phillippy AM … Miga KH
The complete genome of a songbird
bioRxiv, October 14, 2025
Formenti G … Antipov D … Kim J … Koren S … Phillippy A … Rhie A … Jarvis ED
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
Cell Genomics, October 2, 2025
Potapova TA, Kostos P, McKinney S, Borchers M, Haug J, Guarracino A, Solar SJ, Mattingly M, Anez GM, de Lima LG, Wang Y, Zhao C, Hall K, Gogol M, Hoffman S, Antipov D, Rhie A, Cechova M, Miga KH, Garrison E, Phillippy AM, Gerton JL
A complete diploid human genome benchmark for personalized genomics
bioRxiv, September 21, 2025
Hansen NF … Rhie A … Kim J … Antipov D … Pickett BD … Rautiainen M … Solar SJ, Sweeten AP … Koren S … Phillippy AM
Verkko2 integrates proximity ligation data with long-read De Bruijn graphs for efficient telomere-to-telomere genome assembly, phasing, and scaffolding
Genome Research, May 19, 2025
Antipov D, Rautiainen M, Nurk S, Walenz BP, Solar SJ, Phillippy AM, Koren S
Complete sequencing of ape genomes
Nature, April 9, 2025
Yoo D, Rhie A … Solar SJ, Antipov D, Pickett BD … Sweeten AP … Koren S … Phillippy AM, Eichler EE
Critical Assessment of Metagenome Interpretation - the second round of challenges
bioRxiv, July 12, 2021
Meyer F … Antipov D … Nurk S … McHardy AC