MashMap publications
High-throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
Nature Communications, November 30, 2018
Jain C, Rodriguez-R LM, Phillippy AM, Konstantinidis KT, Aluru S
A fast adaptive algorithm for computing whole-genome homology maps
Bioinformatics, September 1, 2018
A fast approximate algorithm for mapping long reads to large reference databases