Publications with Dmitry Antipov, PhD
Postdoctoral Fellow
Automatic generation of model sequences for complex regions in assembly graphs with TTT
The complete genome of a songbird
A complete diploid human genome benchmark for personalized genomics
HPRC2: A human pangenome reference with near-complete coverage of common genetic variation
A complete human pancreatic cancer genome
Biobank-scale genotyping of Robertsonian translocations reveals hidden structural variation on the human acrocentric chromosomes
bioRxiv, March 10, 2026
Rhie A, Kim J, Rodriguez-Algarra F, Solar SJ, Koren S, Antipov D, Wilczewski CM, Maxwell GL, Gerton J, Paschall J, Potapova T, Wolfsberg TG, Singh S, del Castillo del Rio SO, Human Pangenome Reference Consortium, Turner C, Rakyan VK, Phillippy AM
The complete genome of the KOLF2.1J reference iPSC line
Complete genomes of a multi-generational pedigree to expand studies of genetic and epigenetic inheritance
bioRxiv, December 16, 2025
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
Cell Genomics, October 2, 2025
Potapova TA, Kostos P, McKinney S, Borchers M, Haug J, Guarracino A, Solar SJ, Mattingly M, Anez GM, de Lima LG, Wang Y, Zhao C, Hall K, Gogol M, Hoffman S, Antipov D, Rhie A, Cechova M, Miga KH, Garrison E, Phillippy AM, Gerton JL
Verkko2 integrates proximity ligation data with long-read De Bruijn graphs for efficient telomere-to-telomere genome assembly, phasing, and scaffolding
Genome Research, May 19, 2025
Complete sequencing of ape genomes
Critical Assessment of Metagenome Interpretation - the second round of challenges