Brian Ondov

Graduate Student (alum)

UMD
brian.ondovnih.gov

Brian Ondov completed his PhD in the Phillippy lab under the NIH Graduate Partnership Program, earning the degree from the University of Maryland under the advisement of Niklas Elmqvist. He has worked on Krona, Mash, and Harvest, and is now a Postdoc under Dina Demner-Fushman at the National Library of Medicine.

Software

Mash

Fast genome and metagenome distance and containment estimation using MinHash

Harvest

A suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes

Krona

Interactively explore metagenomes and more from a web browser
News posts

Mash Screen: what's in my sequencing run?

September 25, 2017
Publications
The Perceptual Proxies of Visual Comparison
IEEE transactions on visualization and computer graphics, August 20, 2019
Jardine N, Ondov BD, Elmqvist N, Franconeri S
Face to Face: Evaluating Visual Comparison
IEEE Trans Vis Comput Graph, August 20, 2018
Ondov BD, Jardine N, Elmqvist N, Franconeri S