Phillippy

A fast and approximate long read mapper

A single molecule sequence assembler for genomes large and small

Fast genome and metagenome distance and containment estimation using MinHash

A probabilistic sequence overlap algorithm

A suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes

A metagenomic and isolate assembly and analysis pipeline

PacBio read correction and assembly pipeline [ retired ]

Interactively explore metagenomes and more from a web browser

Pan-genome tiling array design for rapid comparative genomics

Automated genome assembly validation [ retired ]

DNA signature discovery for microbial detection and diagnostics [ retired ]

Visual analytics for genome assembly [ retired ]

Comparative genome assembler [ retired ]

A modular sequence assembly infrastructure [ retired ]

Ultra-fast alignment of large-scale DNA and protein sequences

GIS